Resume - Asst. Prof. Dr. Şükrü Anıl Doğan


Asst. Prof. Dr. Şükrü Anıl DOĞAN
Boğaziçi University
Molecular Biology and Genetics
Kuzey Park, 304
34342 Bebek/Istanbul
Turkey
+90 (212) 359 4432
anil.dogan@boun.edu.tr 		  download Dr. Sükrü Anıl Doğan's CV
                (last updated: 14.11.2022)


Education

Start date Graduation date University Department (Program)
PhD Oct-09 Jan-14 CECAD, University of Cologne Genetics
MSc Sep-05 Feb-09 Middle East Technical University Biological Sciences
BSc Sep-00 Aug-05 Middle East Technical University Molecular Biology and Genetics

Academic Titles and Positions

Initial appointment at Boğaziçi University: 10/2/18
First academic position at Boğaziçi University: Assistant Professor
Date of appointment as Assistant Professor at Boğaziçi University: 10/2/18
Date Associate Professorship was granted by YÖK:
Date of promotion to Associate Professor at Boğaziçi University:

Experiences / Appointments (outside BU)

Employer Job Title Employment dates
MRC Mitochondrial Biology Unit, Universirty of Cambridge Investigator Scientist 2014-2018
CECAD, University of Cologne Postdoctoral Researcher 2014
Radio ODTU News Director, Producer, Science Journalist 2001-2009

Research Interests

  • Mitochondria
  • Aging
  • Free Radicals
  • Mitochondrial Diseases
  • Myopathies
  • Molecular Biology and Genetics

Research Projects

Funding Institution Project Title Role Dates
TÜBİTAK 3501- Kariyer Geliştirme Programı Mitokondriyal (Kardiyo)Miyopatinin İki Farklı Yaklaşım Ile Farede İyileştirilmesi Principal Investigator 06/2022 – ongoing
Boğaziçi University Modeling mitochondrial myopathy in mice Principal Investigator 09/2020 – 09/2022
EMBO Installation Grant ROS-Mediated Control of Tissue-Specific Mitochondrial Biogenesis Principal Investigator 01/2019 – 01/2022
TÜBİTAK 2232 - Yurda Dönüş Araştırma Burs Programı İskelet kasına özgü mitokondriyal aspartil-tRNA sentetaz (DARS2) eksikliğinin, özellikle mitokondriyal stres yolakları çerçevesinde, farede karakterize edilmesi Principal Investigator 12/2019 – 12/2021
Bilim Akademisi Genç Bilim İnsanları Ödül Programı Mitokondri Principal Investigator 05/2019 – 05/2021

Publications (overview)

Publications in refereed international journals
Index Publications
(from PhD)		 Publications
(outside PhD)		 Publications
(from BU Graduate Theses)
SCI-E/SSCI/AHCI 3 8 0
ESCI
Scopus
Other indexes
Books
Books International Publishers:
National Publishers:
Book chapters International Publishers:
National Publishers:
Edited Books International Publishers:
National Publishers:

Citations

Web of Science Google Scholar
h-index: 8 8
Number of citations w/o self citation: 423 617
Total number of citations: 429 623

Patents

Patent owner Title Number Application date Publication year Patent office

Theses Supervised

MSc PhD Institution
Completed: 2 Boğaziçi University
Ongoing: 1 Boğaziçi University

Awards

Award Title Awarding Institution Award Year
Excellence in Teaching Award Boğaziçi University 2020
Young Scientist Award (BAGEP 2019) Bilim Akademisi 2019
Postdoctoral Research Associateship (PDRA) Trinity Hall, University of Cambridge 2015
Long-Term Fellowship EMBO 2015
Travel Grant Fellow CECAD 2013
Travel Grant Fellow Gesellschaft fuer Biochemie und Molekularbiologie e.V. (GBM) 2010
Internatioanal CECAD Graduate School PhD Fellowship CECAD 2009

Publications



Publications in refereed international journals

  • Dogan SA, Giacchin G, Zito E, Viscomi C (2022) Redox signaling and stress in inherited myopathies. Antioxid Redox Signal, 37 (4-6), 301-323.

  • Silva-Pinheiro P, Pardo-Hernández C, Reyes A, Tilokani L, Mishra A, Cerutti R, Li S, Rozsivalova DH, Valenzuela S, Dogan SA, Peter B, Fernández-Silva P, Trifunovic A, Prudent J, Minczuk M, Bindoff L, Macao B, Zeviani M, Falkenberg M, Viscomi C (2021) DNA polymerase gamma mutations that impair holoenzyme stability cause catalytic subunit depletion. Nucleic Acids Res, 49: 5230-5248.
    Impact Factor: 19.160, Quartile: Q1 in Genetics

  • Dogan SA, Cerutti R, Benincà C, Brea-Calvo G, Jacobs HT, Zeviani M, Szibor M, Viscomi C (2018) Perturbed Redox Signaling Exacerbates a Mitochondrial Myopathy. Cell Metab, 28: 764–775.e5.
    Impact Factor: 31.373, Quartile: Q1 in Cell Biology, Molecular Biology, Physiology

  • Civiletto G, Dogan SA, Cerutti R, Fagiolari G, Moggio M, Lamperti C, Benincà C, Viscomi C, Zeviani M (2018) Rapamycin rescues mitochondrial myopathy via coordinated activation of autophagy and lysosomal biogenesis. EMBO Mol Med, e8799 10(11)
    Impact Factor: 12.137, Quartile: Q1 in Molecular Medicine

  • Aradjanski M, Dogan SA, Lotter S, Wang S, Hermans S, Wibom R, Rugarli E, Trifunovic A (2017) DARS2 protects against neuroinflammation and apoptotic neuronal loss, but is dispensable for myelin producing cells. Hum Mol Genet, 26: 4181–4189
    Impact Factor: 5.121, Quartile: Q1 in Genetics, Medicine, Molecular Biology

  • Bottani E, Cerutti R, Harbour ME, Ravaglia S, Dogan SA, Giordano C, Fearnley IM, D’Amati G, Viscomi C, Fernandez-Vizarra E, Zeviani M (2017) TTC19 Plays a Husbandry Role on UQCRFS1 Turnover in the Biogenesis of Mitochondrial Respiratory Complex III. Mol Cell, 67: 96–105.e4
    Impact Factor: 19.328, Quartile: Q1 in Cell Biology, Molecular Biology

  • Dogan SA, Pujol C, Maiti P, Kukat A, Wang S, Hermans S, Senft K, Wibom R, Rugarli EI, Trifunovic A (2014) Tissue-specific loss of DARS2 activates stress responses independently of respiratory chain deficiency in the heart. Cell Metab, 19: 458–469
    Impact Factor: 31.373, Quartile: Q1 in Cell Biology, Molecular Biology, Physiology

  • Kukat A, Dogan SA, Edgar D, Mourier A, Jacoby C, Maiti P, Mauer J, Becker C, Senft K, Wibom R, Kudin AP, Hultenby K, Flögel U, Rosenkranz S, Ricquier D, Kunz WS, Trifunovic A (2014) Loss of UCP2 attenuates mitochondrial dysfunction without altering ROS production and uncoupling activity. PLoS Genet, 10: e1004385
    Impact Factor: 5.917, Quartile: Q1 in Genetics, Molecular Biology, Cancer Research

  • Demirci S, Koban Baştanlar E, Dağtaş ND, Pişkin E, Engin A, Ozer F, Yüncü E, Doğan SA, Togan I (2013) Mitochondrial DNA diversity of modern, ancient and wild sheep (Ovis gmelinii anatolica) from Turkey: new insights on the evolutionary history of sheep. PLoS One, 8: e81952
    Impact Factor: 3.58, Quartile: Q1

  • Yüncü E, Demirci S, Baştanlar EK, Doğan ŞA, Taşdemir U, Togan İ (2013) Comparative study of three simple molecular approaches in search of mtDNA haplogroup identification of domestic sheep. Small Ruminant Research, 114: 64–71
    Impact Factor: 1.893, Quartile: Q2 in Animal Science and Zoology, Food Animals

  • Dogan SA, Trifunovic A (2011) Modelling mitochondrial dysfunction in mice. Physiol Res, 60 Suppl 1: S61–7
    Impact Factor: 2.139, Quartile: Q2 in Medicine, Q3 in Physiologybr>

Books, Book chapters, and Editorschips for international publishers



Publications in refereed national journals



Books, Book chapters, and Editorschips for national publishers



Supervised Theses

Ongoing
  • Alleviating mitochondrial myopathy in mice. Semin Erkul. Expected to be finished in 2022.

Completed
  • Preliminary Characterization of a Novel Mitochondrial Myopathy Mouse Model. Mehmet Yılmaz. 2022.

  • Further Characterization of Heart- and Skeletal Muscle-Specific Mitochondrial Aspartyl-tRNA Synthetase (DARS2) Knockout Mouse. Özlem Kartal. 2022

Conference Presentations

Conference contributions of the past 3 years
  • EMBO Young Investigator Network (YIN) Meeting (06/2022, Heidelberg, Germany). Mitochondrial Stress Responses in Myopathies.

  • EMBO Young Investigator Network (YIN) Meeting (07/2021, Heidelberg, Germany - Online). ROS-mediated control of mitochondrial biogenesis.

  • 7th International Congress of the Molecular Biology Association of Turkey (MolBiyoKon ’19) (09/2019, Istanbul, Turkey). Perturbed Redox Signaling Exacerbates a Mitochondrial Myopathy.

  • EMBO/FEBS Lecture Course, Mitochondria in Life, Death and Disease (09/2019, Herceg Novi, Montenegro). ROS-mediated control of mitochondrial biogenesis.

Administrative Positions

Institution Faculty / Department Position Dates
- - - -

Courses of the past 5 years

Code Name Term Faculty Percentile Rank
BIO 102.01 Cellular and Molecular Biology II 2018/2019-1 -
BIO 106.01 Cell Biology Lab 2018/2019-1 -
BIO 308.01 Seminar I 2018/2019-1 -
BIO 152.01 Introduction to Modern Biology 2018/2019-2 68,48 / 75,36 (Instructor)
BIO 407.01 Seminar II 2018/2019-2 99,28 / 97,10 (Instructor)
BIO 101.02 Cellular and Molecular Biology I 2019/2020-1 94,12 / 88,24 (Instructor)
BIO 308.01 Seminar I 2019/2020-1 95,13 / 93,51 (Instructor)
BIO 491.03 Special Project I 2019/2020-1 -
BIO 500.02 Modern Techniques in Molecular Biology 2019/2020-1 -
BIO 152.01 Introduction to Modern Biology 2019/2020-2 59,78 / 62,73 (Instructor)
BIO 308.02 Seminar I 2019/2020-2 98,52 / 98,52 (Instructor)
BIO 492.03 Special Project II 2019/2020-2 -
BIO 520.02 Lab Projects in Biology 2019/2020-2 -
BIO 101.02 Cellular and Molecular Biology I 2020/2021-1 91,53 / 89,15 (Instructor)
BIO 407.01 Seminar II 2020/2021-1 97,63 / 96,61 (Instructor)
BIO 500.02 Modern Techniques in Molecular Biology 2020/2021-1 -
BIO 579.01 Graduate Seminar 2020/2021-1 -
BIO 690.03 M.S. Thesis 2020/2021-1 -
BIO 152.02 Introduction to Modern Biology 2020/2021-2 25,64 / 29,34 (Instructor)
BIO 58C.01 Mitochondrial Biology & Medicine 2020/2021-2 79,41 / 79,41 (Instructor)
BIO 690.02 M.S. Thesis 2020/2021-2 -
BIO 700.01 Graduate Seminar 2020/2021-2 -
BIO 101.01 Cellular and Molecular Biology I 2020/2021-3 29,63 / 35,19 (Instructor)
BIO 101.02 Cellular and Molecular Biology I 2021/2022-1 61,97 / 70,09 (Instructor)
BIO 407.01 Seminar II 2021/2022-1 -
BIO 491.02 Special Project I 2021/2022-1 -
BIO 500.02 Modern Techniques in Molecular Biology 2021/2022-1 -
BIO 601.02 Advanced Techniques in Molecular Biology 2021/2022-1 -
BIO 690.02 M.S. Thesis 2021/2022-1 -
BIO 101.01 Cellular and Molecular Biology I 2021/2022-2 75,86 / 78,82 (Instructor)
BIO 58C.01 Mitochondrial Biology & Medicine 2021/2022-2 -
BIO 492.02 Special Project II 2021/2022-2 -
BIO 520.02 Laboratory Projects in Biology 2021/2022-2 -
BIO 690.10 M.S. Thesis 2021/2022-2 -
BIO 101.01 Cellular and Molecular Biology I 2022/2023-1
BIO 111.01 Prelude to Molecular Biology 2022/2023-1
BIO 407.02 Seminar II 2022/2023-1
BIO 491.02 Special Project I 2022/2023-1 -
BIO 500.02 Modern Techniques in Molecular Biology 2022/2023-1 -
BIO 601.11 Advanced Techniques in Molecular Biology 2022/2023-1 -
BIO 690.02 M.S. Thesis 2022/2023-1 -



last updated: 14.11.2022